Ensembl, NCBI, Gene Ontology, KEGG Pathways, PubMed, Genomic Variations and
many other databases to retrieve up-to-date annotation information for over 30
species, based on gene symbol search. The application provides gene and transcript
cross reference information for NCBI, Ensembl, RefSeq and UniProt. SimGene also
contains an integrated genome browser with information on genes, transcripts,
exons and SNPs.
*Nominated "Best Educational Series" IAWTV*
*"(The Digits) are awesome!" -Wired Geekdad*
The Digits: Fraction Blast
Meet The Digits!
This app is an interactive video with digital mini-games that teach fractions. It's designed for learners aged 7-11, and helps students learn and practice their fractions and other math skills.
The Digits is the greatest unknown rock band in the galaxy. This world premiere "Appisode" combines live action video with over a dozen interactions and minigames that help teach a math curriculum focusing on fractions.
Join Pavi, Gorgolax, and Ray Ray as they fight the evil Marvwell Doomfinger III who wants to use music to make the galaxy stupider.
Play Pavi's Bass Guitar
Hack into the Doomship
Escape from Monsters and Evil Robots.
Get awesome achievements drawn by some of the hottest comic book artists: Shannon Wheeler, Ron Chan, Derek Kirk Kim.
All while learning a math curriculum designed by a 20 year veteran teacher. Recommended for ages 7 and up.
The app also connects you to further adventures of The Digits through our Youtube Channel.
For parents there is an optional subscription service that provides updates on what the player is learning, and ways to bring this out-of-this-world math curriculum into the player's every day life.
We packed a lot of action into The Digits , but just so you know, there's a big download of a file after you install. Depending on your internet speed it can take a few minutes so please be patient. Trust me, it's worth it.
== About ==
NDKmol is a molecular viewer for Android. You can view three dimensional structures of proteins, nucleic acids and small molecules. NDKmol supports most of common representations for molecules, such as ribbon, trace, stick, sphere and line. NDKmol also supports symmetry operations; biological assemblies and crystal packing can be displayed. You can search and download structures from RCSB PDB and NCBI Pubchem.
NDKmol has almost same functionality as GLmol, which is written in
== Features ==
* Read PDB or SDF/MOL file
* Rotate/Translate/Zoom model by finger
- Sphere(van der Waals radius)
- Alpha carbon trace
- Ribbon (Thin or Thick)
- B factor tube
- Nucleic acid ladder
- Nucleic acid line
- solvent 'stars'
* Smoothing of beta-sheets
- By chain
- By secondary structure(when defined in SHEET/HELIX records)
- By Elements
- Gradation (a.k.a chainbow)
- B factor
- Display unit cell
- Show crystal packing (when defined in REMARK section)
- Display biological assembly (when defined in REMARK section)
== How to Use ==
When launched, NDKmol automatically loads Porin (PDBID: 2POR) as an example. You can rotate the molecule by your finger.
To zoom or translate the molecule, press MENU button in your phone/tablet and select the mode. Two-finger gestures are also supported.
Everything else can be done from the MENU.
To load other PDB files, please put the file in "PDB" directory of the SD card and select "Open" command in the MENU. You can also download structures directly from RCSB PDB and NCBI PubChem web server. Select "Search and Download" in the menu.
== Contact ==
Project website is located at http://webglmol.sourceforge.jp/ . You can get source codes for this program from here.
=== LICENSE notice ===
NDKmol itself is licensed under GNU Lesser General Public License as follows.
However, PDB files included as examples are under DIFFERENT conditions.
NDKmol - Molecular Viewer for Android
(C) Copyright 2011, biochem_fan
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU Lesser General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.